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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs1652546 chr8:4339105 C/T CNOT7 chr8:17082473-17104387:- -1.06 -7.28 1.69E-11 Box Plot
UCEC rs1652546 chr8:4339105 C/T POLR3D chr8:22102617-22112113:+ -1.13 -7.3 1.5E-11 Box Plot
UCEC rs1652546 chr8:4339105 C/T TNKS chr8:9413424-9639856:+ -0.85 -7.16 3.3E-11 Box Plot
UCEC rs169366 chr11:49192092 G/A FOLH1B chr11:89372395-89431886:+ 0.59 7.65 2.16E-12 Box Plot
UCEC rs17078781 chr5:176544228 G/A LOC388955 chr2:63849182-63850159:- -0.75 -7.01 7.14E-11 Box Plot
UCEC rs172129 chr11:49219926 A/C FOLH1B chr11:89372395-89431886:+ 0.55 7.03 6.64E-11 Box Plot
UCEC rs17743799 chr18:29963113 A/G HVCN1 chr12:111065646-111142755:- 0.73 7.03 6.54E-11 Box Plot
UCEC rs177460 chr7:28300234 G/A LOC100144603 chr22:51021455-51022353:+ -0.55 -6.96 9.64E-11 Box Plot
UCEC rs177461 chr7:28300469 C/A LOC100144603 chr22:51021455-51022353:+ -0.55 -6.96 9.64E-11 Box Plot
UCEC rs177463 chr7:28301687 C/T LOC100144603 chr22:51021455-51022353:+ -0.55 -6.96 9.7E-11 Box Plot
UCEC rs177464 chr7:28301970 G/A LOC100144603 chr22:51021455-51022353:+ -0.55 -6.96 9.7E-11 Box Plot
UCEC rs182169 chr11:49207315 A/G FOLH1B chr11:89372395-89431886:+ 0.57 7.41 8.35E-12 Box Plot
UCEC rs1831478 chr9:32310484 A/T MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs1831479 chr9:32316909 T/C MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot
UCEC rs1854528 chr9:32316496 G/A MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot